Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_3893
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.4
temperature	Growth at 10C	-1.2
nitrogen source	no extra (N); with MOPS	-1.1
temperature	Growth at 10C; with MOPS	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
temperature	Growth at 10C; with MOPS	-0.8
pH	Growth at pH6 and (C) Trisodium citrate	-0.8
temperature shift	Temperature shift 30_to_25; with MOPS	-0.8
pH	pH 7	-0.8
carbon source	ferulate (C); with MOPS	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
carbon source	D-Glucose (C)	-0.8
temperature	Growth at 10C; with MOPS	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.7
temperature shift	Temperature shift 30_to_4	-0.7
nitrogen source	nitrate (N)	-0.7
temperature	Growth at 10C	-0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
temperature	Growth at 25C; with MOPS	-0.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7
temperature shift	Temperature shift 10_to_30; with MOPS	-0.7
temperature shift	Temperature shift 30_to_4; with MOPS	-0.7
temperature	LB 42C	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.7
nitrogen source	2,6-diaminopimelic (N)	+0.9
		remove PP_3893