Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3839
carbon source	DL-2-Aminoadipic 10 mM (C)	-2.5
carbon source	1-Pentanol (C)	-1.8
carbon source	2,3-Butanediol (C)	-1.1
nitrogen source	Propandiamine (N)	-0.7
carbon source	Butanol (C)	-0.7
carbon source	ferulate (C); with MOPS	-0.6
nitrogen source	D-2-Aminobutyric (N)	-0.6
carbon source	Butanol (C)	-0.5
carbon source	Butanol (C)	-0.5
nitrogen source	Ammonium chloride (N)	-0.5
pH	Growth at pH7 and (C) Trisodium citrate	-0.5
phage	P. putida PUT10 MOI 10	-0.5
temperature shift	Temperature shift 30_to_21; with MOPS	-0.4
nitrogen source	NAG (N); with MOPS	-0.4
nitrogen source	Propandiamine (N)	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.4
carbon source	Succinic Acid (C)	-0.4
nitrogen source	NAG (N); with MOPS	-0.4
temperature shift	Temperature shift 10_to_30	-0.4
micoeukaryotes	C.elegans, mixed culture-1	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
carbon source	Rhamnogalacturonan - from potato (C)	-0.4
carbon source	carbon source Bisabolene 48.9 mM	+0.4
carbon source	ferulate (C); with MOPS	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
phage	P. putida Missley MOI 0.1	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
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