Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3813
temperature shift Temperature shift 10_to_30; with MOPS -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.7
temperature shift Temperature shift 30_to_34; with MOPS -0.7
phage P. putida Sci small MOI 0.1 -0.6
pH pH 5 -0.6
carbon source carbon source D-Glucose 55.5 mM -0.6
stress Isobutyl alcohol 0.6 vol% -0.6
phage P. putida South MOI 10 -0.6
stress R2A with Fusaric 240 ug/mL -0.6
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
pH pH 6 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
carbon source Lauric (C) -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
carbon source 5-Aminovaleric 10 mM (C) -0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
phage PUT8 MOI 0.1 -0.5
carbon source 4-Methyl-2-oxopentanoic (C) -0.5
nitrogen source Caprolactam (N) +0.5
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.5
pH Growth at pH6 and (C) D-Glucose +0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6
carbon source D-Glucose (C) +0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
nitrogen source D-2-Aminobutyric (N) +0.9
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PP_3813