Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3802
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5
pH	pH 9	-1.2
phage	P. putida PUT 7 MOI 1	-1.1
pH	Growth at pH7 and (C) D-Glucose	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0
phage	P. putida Sci small MOI 0.1	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
stress	R2A with Fusaric 240 ug/mL	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
nitrogen source	no extra (N); with MOPS	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.8
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.8
nitrogen source	nitrogen source nitrite 1mM	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-0.7
nitrogen source	nitrogen source nitrate 5mM	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.7
toxin	pUC18_phdP1_pSU18T_docP1	+0.7
nitrogen source	D-2-Aminobutyric (N)	+0.8
carbon source	Myristic (C)	+0.8
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+1.0
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