Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3794
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1
carbon source D-Glucose (C) -0.6
pH pH 6 -0.5
phage P. putida South MOI 10 -0.5
pH pH 9 -0.5
pH pH 4 -0.5
pH pH 5 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4
carbon source D-Glucose (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
carbon source carbon source 4-vinylphenol 0.01 mM -0.4
nitrogen source D-2-Aminobutyric (N) -0.4
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4
pH Growth at pH8 and (C) Trisodium citrate +0.4
carbon source D-Glucose (C); with MOPS +0.4
carbon source 5-Aminovaleric 10 mM (C) +0.4
stress R2A with Fusaric 480 ug/mL +0.4
temperature Growth at 25C; with MOPS +0.4
carbon source D-Fructose (C) +0.4
carbon source 2,3-Butanediol (C) +0.5
nitrogen source L-Leucine (N) +0.5
r2a control R2A control +0.6
carbon source ferulate (C); with MOPS +0.7
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PP_3794