Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3775
nitrogen source	Ammonium chloride (N)	-0.4
nitrogen source	D-2-Aminobutyric (N)	-0.4
nitrogen source	nitrite (N)	-0.3
carbon source	D-Glucose (C)	-0.3
nitrogen source	NAG (N); with MOPS	-0.3
nitrogen source	Hydantoin (N)	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.3
carbon source	Crotonic (C)	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
carbon source	carbon source Glycerol 108.6 mM	+0.3
pH	Growth at pH6 and (C) D-Glucose	+0.3
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.3
carbon source	2,3-Butanediol (C)	+0.3
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	+0.3
nitrogen source	nitrogen source nitrate 20mM	+0.3
nitrogen source	Hippuric (N)	+0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.3
nitrogen source	Glycine (N)	+0.3
stress	R2A with Fusaric 240 ug/mL	+0.3
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.3
nitrogen source	Glycine (N)	+0.3
carbon source	carbon source Bisabolol 45 mM	+0.3
phage	P. putida Sci small MOI 0.1	+0.3
phage	P. putida Sci Big MOI 0.1	+0.4
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.4
carbon source	3-Hydroxydecanoic (C)	+0.4
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.4
pH	pH 8	+0.4
nitrogen source	Hippuric (N)	+0.5
		remove PP_3775