Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3758
carbon source	ferulate (C); with MOPS	-1.1
phage	P. putida PUT 7 MOI 1	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
carbon source	L-Leucine (C)	-0.8
nitrogen source	Uracil (N)	-0.8
carbon source	5-Hydroxydodecanoate (C)	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
temperature shift	Temperature shift 10_to_34; with MOPS	-0.6
nitrogen source	nitrite (N)	-0.6
lb	LB	-0.6
carbon source	3-Hydroxydecanoic (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
nitrogen source	Uracil (N)	-0.6
nitrogen source	1,6-Hexanediamine (N)	-0.6
nitrogen source	Carnitine Hydrochloride (N)	-0.6
carbon source	Vanillin (C)	-0.6
nitrogen source	L-Isoleucine (N)	-0.6
phage	P. putida PUT10 MOI 0.1	+0.6
nitrogen source	Ammonium chloride (N)	+0.6
stress	3-methyl-1-butanol 0.4 vol%	+0.6
temperature	Growth at 30C; with MOPS	+0.6
pH	Growth at pH9 and (C) Trisodium citrate	+0.6
phage	P. put South MOI 10	+0.7
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.7
carbon source	Delta-Undecalactone (C)	+0.7
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