Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3746
phage P. putida Sci small MOI 0.1 -1.1
nitrogen source Propandiamine (N) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
carbon source carbon source 4-vinylphenol 0.1 mM -0.7
carbon source acetate (C) -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7
carbon source carbon source 3-O-methyl-glucose 50 mM -0.6
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.6
phage P. putida Missley MOI 0.1 -0.6
stress R2A with Fusaric 480 ug/mL -0.6
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.6
carbon source Ethyl decanoate (C) -0.6
phage P. putida South MOI 10 -0.6
temperature shift Temperature shift 30_to_25; with MOPS -0.6
carbon source D-Glucose (C) -0.6
nitrogen source Cytosine (N) -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
r2a control R2A control -0.5
temperature shift Temperature shift 10_to_25; with MOPS -0.5
carbon source Mucic (C) -0.5
carbon source D-Glucose (C) +0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6
carbon source Butanol (C) +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6
pH Growth at pH7 and (C) Trisodium citrate +0.6
no stress control Growth with no stress +0.7
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PP_3746