Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3736
carbon source Vanillin (C) -7.2
carbon source Vanillic Acid (C) -6.4
carbon source Ferulic Acid (C) -6.2
carbon source Vanillic Acid (C) -5.7
carbon source Vanillin (C) -5.7
carbon source ferulate (C); with MOPS -5.3
carbon source Vanillin (C) -5.3
carbon source Ferulic Acid (C) -5.2
carbon source Vanillin (C) -4.4
carbon source ferulate (C); with MOPS -4.2
carbon source ferulate (C); with MOPS -3.8
carbon source Ferulic Acid (C) -2.1
phage P. putida PUT 7 MOI 1 -1.0
carbon source Vanillic Acid (C) -1.0
phage P. putida Sci Big MOI 0.1 -0.7
phage P. putida Missley MOI 0.1 -0.7
nitrogen source NAG (N); with MOPS -0.6
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4
nitrogen source Ammonium chloride (N) +0.4
carbon source D-Glucose (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
pH Growth at pH6 and (C) D-Glucose +0.5
temperature Growth at 30C; with MOPS +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
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PP_3736