Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3732
phage	P. putida Sci small MOI 0.1	-1.9
pH	Growth at pH6 and (C) D-Glucose	-1.5
phage	P. putida Missley MOI 0.1	-1.3
phage	P. putida PUT 7 MOI 1	-1.1
temperature	Growth at 30C; with MOPS	-1.0
nitrogen source	2,6-diaminopimelic (N)	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
nitrogen source	NAG (N); with MOPS	-0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.8
phage	P. put South MOI 10	-0.8
phage	P. putida Sci Big MOI 0.1	-0.7
stress	R2A with Fusaric 240 ug/mL	-0.7
pH	Growth at pH7 and (C) Trisodium citrate	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.7
temperature	Growth at 30C	-0.7
phage	PUT8 MOI 0.1	-0.7
stress	R2A with Fusaric 480 ug/mL	-0.7
stress	R2A with Fusaric 480 ug/mL	-0.7
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
carbon source	ferulate (C); with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
carbon source	Lauric (C)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6
pH	pH 9	+0.7
carbon source	L-Lysine (C)	+0.9
carbon source	L-Lysine (C)	+1.3
carbon source	L-Lysine 10 mM (C)	+1.8
		remove PP_3732