Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_3723
phage P. putida PUT 7 MOI 1 -1.3
nitrogen source 2,6-diaminopimelic (N) -1.2
phage P. putida Sci Big MOI 0.1 -1.0
carbon source L-Arginine (C) -0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9
carbon source 3-Hydroxydecanoic (C) -0.7
pH Valerolactone (C) pH 6.5 -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
nitrogen source Propandiamine (N) -0.6
phage PUT 8 MOI 1 -0.6
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5
pH pH 5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
temperature Growth at 25C; with MOPS -0.5
nitrogen source Ammonium chloride (N); with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -0.4
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
carbon source Crotonic (C) +0.5
carbon source 3-methyl-1-butanol (C) +0.5
temperature Growth at 25C +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5
nitrogen source Urea (N); with MOPS +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.7
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.9
micoeukaryotes Dictyostellum sp.mixed culture-2 +1.1
micoeukaryotes C.elegans, mixed culture-1 +1.1
micoeukaryotes C.elegans, mixed culture-2 +1.2
remove
PP_3723