Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3720
phage	P. putida Sci Big MOI 0.1	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
stress	R2A with Fusaric 240 ug/mL	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
nitrogen source	Urea (N)	-0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
phage	PUT 8 MOI 1	-0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.5
pH	Growth at pH9 and (C) D-Glucose	-0.4
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.4
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
no stress control	Growth with no stress	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.4
phage	P. putida Missley MOI 0.1	-0.4
pH	Growth at pH6 and (C) D-Glucose	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4
nitrogen source	Urea (N); with MOPS	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	L-Leucine (C)	+0.6
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