Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3713
carbon source	benzoic (C)	-1.4
carbon source	benzoic (C)	-1.4
carbon source	benzoic (C)	-1.0
carbon source	ferulate (C); with MOPS	-0.8
temperature shift	Temperature shift 30_to_21; with MOPS	-0.6
stress	Butyrolactam 2 vol%	-0.6
carbon source	D-Glucose (C)	-0.6
phage	PUT8 MOI 0.1	-0.6
stress	Cholinium glutamate 10 vol%	-0.6
pH	Growth at pH6 and (C) D-Glucose	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
nitrogen source	Propiolactam (N)	-0.5
nitrogen source	2,6-diaminopimelic (N)	-0.5
pH	Growth at pH8 and (C) Trisodium citrate	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.5
carbon source	1,4-Butanediol (C)	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.5
temperature shift	Temperature shift 30_to_25	-0.5
nitrogen source	L-Phenylalanine (N)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
stress	R2A with Fusaric 240 ug/mL	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
stress	Growth with Chloride 500 mM; with MOPS	+0.5
phage	P. put PUT 10 MOI 10	+0.5
carbon source	1,3-Butandiol (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
temperature	Growth at 30C	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.6
		remove PP_3713