Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3652
nitrogen source	D-2-Aminobutyric (N)	-1.0
phage	P. putida Missley MOI 0.1	-0.7
nitrogen source	D-2-Aminobutyric (N)	-0.7
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
carbon source	ferulate (C); with MOPS	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
carbon source	Trisodium citrate (C)	-0.6
pH	Growth at pH9 and (C) Trisodium citrate	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	-0.5
temperature	Growth at 30C	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
carbon source	2,3-Butanediol (C)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
carbon source	ferulate (C); with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.4
phage	PUT8 MOI 0.1	-0.4
temperature shift	Temperature shift 30_to_21	-0.4
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.4
nitrogen source	no extra (N)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
phage	P. putida Sci small MOI 0.1	-0.4
nitrogen source	Urea (N)	-0.4
carbon source	Valerolactam 10 mM (C)	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
micoeukaryotes	C.elegans, mixed culture-2	+0.5
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