Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3638
carbon source	ferulate (C); with MOPS	-1.4
carbon source	Delta-Undecalactone (C)	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9
carbon source	3-Hydroxydecanoic (C)	-0.9
pH	Growth at pH6 and (C) Trisodium citrate	-0.9
pH	Growth at pH7 and (C) Trisodium citrate	-0.9
pH	Growth at pH6 and (C) Trisodium citrate	-0.9
nitrogen source	nitrite (N)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8
carbon source	ferulate (C); with MOPS	-0.8
temperature shift	Temperature shift 10_to_25; with MOPS	-0.8
carbon source	Delta-Dodecalactone (C)	-0.8
pH	Growth at pH8 and (C) D-Glucose	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.7
carbon source	Delta-Nonalactone (C)	-0.7
no stress control	Growth with no stress	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	-0.7
carbon source	Delta-Dodecalactone (C)	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.6
nitrogen source	nitrogen source nitrite 1mM	-0.6
carbon source	Beta-alanine (C)	-0.6
pH	pH 5	+0.7
temperature	Growth at 30C; with MOPS	+0.7
carbon source	carbon source D-Glucose 55.5 mM	+0.7
carbon source	Octanoic (C)	+0.7
phage	PUT8 MOI 0.1	+0.7
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+0.8
nitrogen source	D-2-Aminobutyric (N)	+0.9
		remove PP_3638