Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3601
carbon source D-Galacturonic Acid (C) -6.2
carbon source D-Galacturonic Acid (C) -5.9
carbon source Mucic (C) -5.1
carbon source Mucic (C) -4.9
carbon source Rhamnogalacturonan - from potato (C) -2.0
carbon source Rhamnogalacturonan - from potato (C) -1.8
carbon source D-Glucuronic gamma lactone (C) -0.9
carbon source D-Glucuronic gamma lactone (C) -0.8
carbon source D-Glucaric (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
pH Growth at pH9 and (C) Trisodium citrate -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5
phage P. putida Sci small MOI 0.1 -0.5
nitrogen source NAG (N); with MOPS -0.5
pH pH 7 -0.5
carbon source Glucose (C) (40mM) -0.5
temperature Growth at 25C -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.5
phage P. putida PUT 7 MOI 1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
carbon source D-Glucaric (C) -0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
pH Growth at pH8 and (C) D-Glucose +0.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5
carbon source carbon source 4-vinylphenol 0.1 mM +0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5
nitrogen source NAG (N); with MOPS +0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6
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PP_3601