Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3598
nitrogen source	Putrescine (N)	-4.0
nitrogen source	Putrescine (N)	-3.5
nitrogen source	Putrescine (N)	-2.1
nitrogen source	Propandiamine (N)	-1.8
nitrogen source	Propandiamine (N)	-1.6
phage	P. putida PUT 7 MOI 1	-1.0
nitrogen source	spermidine (N)	-1.0
nitrogen source	spermidine (N)	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
carbon source	L-Leucine (C)	-0.5
carbon source	L-tyrosine 5 mM (C)	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
carbon source	D-Glucose (C) 2.5 mM	-0.4
carbon source	ferulate (C); with MOPS	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
phage	PUT 8 MOI 1	-0.4
no stress control	Growth with no stress	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
phage	P. putida Sci small MOI 0.1	-0.4
carbon source	carbon source D-Glucose 55.5 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.4
pH	Growth at pH9 and (C) D-Glucose	+0.4
pH	Growth at pH8 and (C) D-Glucose	+0.4
pH	pH 7	+0.4
pH	Valerolactone (C) pH 6.5	+0.4
temperature shift	Temperature shift 10_to_25; with MOPS	+0.5
nitrogen source	nitrate (N)	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.6
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