Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3566
nitrogen source	2,6-diaminopimelic (N)	-0.6
carbon source	Valeric (C)	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
carbon source	ferulate (C); with MOPS	-0.5
carbon source	Delta-Undecalactone (C)	-0.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.4
pH	Growth at pH8 and (C) D-Glucose	-0.4
carbon source	2,3-Butanediol (C)	-0.4
carbon source	D-Glucose (C)	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.4
phage moi 100	Time6-phageFRS	-0.4
nitrogen source	nitrate (N)	-0.4
carbon source	2-Methylbutanoic (C)	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
phage	PUT 8 MOI 1	-0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3
stress	Growth with Chloride 500 mM; with MOPS	-0.3
temperature	Growth at 25C; with MOPS	-0.3
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
pH	Growth at pH7 and (C) Trisodium citrate	-0.3
nitrogen source	Urea (N)	+0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.3
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	+0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
nitrogen source	Hydantoin (N)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
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