Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3554
carbon source	butyrate (C)	-3.2
carbon source	butyrate (C)	-3.1
carbon source	Butanol (C)	-2.6
carbon source	butyrate (C)	-2.6
carbon source	Butanol (C)	-2.5
carbon source	Butanol (C)	-2.4
carbon source	Hexanoic (C)	-1.3
carbon source	Valeric (C)	-0.9
carbon source	Valeric (C)	-0.8
carbon source	Hexanoic (C)	-0.7
carbon source	Hexanoic (C)	-0.6
carbon source	Valeric (C)	-0.5
stress	3-methyl-1-butanol 0.4 vol%	-0.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
carbon source	1-Pentanol (C)	-0.4
nitrogen source	nitrogen source nitrite 1mM	-0.4
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	-0.4
temperature	Growth at 30C; with MOPS	-0.4
nitrogen source	Propandiamine (N)	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.4
carbon source	ferulate (C); with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
carbon source	Nonanoic (C)	-0.3
nitrogen source	NAG (N); with MOPS	-0.3
stress	3-methyl-3-butenol (pure) 0.25 vol%	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.3
carbon source	propionate (C)	-0.3
carbon source	ferulate (C); with MOPS	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
		remove PP_3554