Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3547
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
nitrogen source	nitrogen source nitrite 1mM	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
phage	P. putida South MOI 10	-0.4
time series	Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement	-0.4
pH	Valerolactone (C) pH 6.5	-0.4
nitrogen source	Propiolactam (N)	-0.4
temperature shift	Temperature shift 30_to_10; with MOPS	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
nitrogen source	nitrate (N)	+0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4
pH	Growth at pH6 and (C) D-Glucose	+0.4
pH	Growth at pH6 and (C) D-Glucose	+0.4
pH	Growth at pH8 and (C) D-Glucose	+0.4
temperature shift	Temperature shift 30_to_25	+0.4
carbon source	Trisodium citrate (C)	+0.4
phage	P. putida Missley MOI 0.1	+0.4
temperature shift	Temperature shift 30_to_10	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
phage	P. putida Sci Big MOI 0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.5
temperature shift	Temperature shift 30_to_25	+0.5
carbon source	D-Glucose (C)	+0.5
pH	Growth at pH7 and (C) D-Glucose	+0.5
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