Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3545
pH Growth at pH7 and (C) Trisodium citrate -0.5
pH Growth at pH6 and (C) D-Glucose -0.4
nitrogen source no extra (N); with MOPS -0.4
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.4
carbon source ferulate (C); with MOPS -0.4
carbon source 4-Methyl-2-oxopentanoic (C) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3
pH Growth at pH6 and (C) D-Glucose -0.3
phage P. putida South MOI 10 -0.3
nitrogen source TNT (N) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3
carbon source Valerolactone (C) -0.3
pH pH 7 -0.3
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.3
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
nitrogen source Urea (N) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3
pH Growth at pH9 and (C) D-Glucose +0.3
nitrogen source 2,6-diaminopimelic (N) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3
pH pH 8 +0.3
nitrogen source Propiolactam (N) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
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PP_3545