Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3532
nitrogen source	NAG (N); with MOPS	-6.6
nitrogen source	2,6-diaminopimelic (N)	-4.1
pH	Growth at pH6 and (C) Trisodium citrate	-3.4
carbon source	1,3-Butandiol (C)	-3.2
carbon source	Valeric (C)	-3.1
nitrogen source	Urea (N); with MOPS	-2.9
phage	PUT 8 MOI 1	-2.7
temperature shift	Temperature shift 10_to_30; with MOPS	-2.3
nitrogen source	Urea (N)	-2.2
carbon source	Rhamnogalacturonan - from potato (C)	-2.1
temperature shift	Temperature shift 10_to_30; with MOPS	-2.0
pH	Growth at pH6 and (C) Trisodium citrate	-2.0
r2a control	R2A control	-2.0
temperature shift	Temperature shift 10_to_25; with MOPS	-1.9
carbon source	L-Leucine (C)	-1.9
carbon source	Trisodium citrate (C)	-1.9
toxin	pUC18_phdP1_pSU18T_docP1	-1.6
pH	Growth at pH8 and (C) D-Glucose	-1.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.6
carbon source	ferulate (C); with MOPS	-1.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.5
temperature shift	Temperature shift 10_to_21; with MOPS	-1.5
carbon source	carbon source 3-O-methyl-glucose 10 mM	-1.4
carbon source	L-Leucine (C)	-1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.4
carbon source	5-Aminovaleric 10 mM (C)	-1.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.4
carbon source	ferulate (C); with MOPS	-1.4
carbon source	butyrate (C)	+1.5
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