Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3514
nitrogen source	Valerolactam (N)	-3.8
nitrogen source	Valerolactam (N)	-3.6
carbon source	L-Lysine (C)	-0.4
carbon source	Valerolactam (C)	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
temperature shift	Temperature shift 30_to_21	-0.4
carbon source	D-Lysine 10 mM (C)	-0.4
nitrogen source	5-Aminovaleric (N)	-0.4
nitrogen source	Urea (N)	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3
carbon source	Myristic (C)	-0.3
carbon source	L-Lysine (C)	-0.3
nitrogen source	D-2-Aminobutyric (N)	-0.3
temperature shift	Temperature shift 10_to_30	-0.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3
nitrogen source	nitrate (N)	-0.3
temperature shift	Temperature shift 10_to_21; with MOPS	-0.3
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
stress	Butyrolactam 2 vol%	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
phage	P. putida Sci Big MOI 0.1	+0.3
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.3
carbon source	5-Aminovaleric 10 mM (C)	+0.5
carbon source	5-Aminovaleric 10 mM (C)	+0.7
nitrogen source	Caprolactam (N)	+1.2
nitrogen source	Caprolactam (N)	+1.3
nitrogen source	Caprolactam (N)	+1.3
nitrogen source	Caprolactam (N)	+1.3
carbon source	Valerolactam 10 mM (C)	+1.3
		remove PP_3514