Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3510
nitrogen source	L-Valine (N)	-1.0
nitrogen source	DL-2-Aminobutyric (N)	-0.9
nitrogen source	DL-2-Aminobutyric (N)	-0.9
nitrogen source	L-Valine (N)	-0.9
nitrogen source	D-2-Aminobutyric (N)	-0.9
carbon source	L-Isoleucine (C)	-0.8
carbon source	D-Glucose (C)	-0.8
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.8
carbon source	L-Isoleucine (C)	-0.7
nitrogen source	L-Isoleucine (N)	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.7
carbon source	L-Valine (C)	-0.6
carbon source	L-Valine (C)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	L-Valine (C)	-0.5
carbon source	butyrate (C)	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
carbon source	ferulate (C); with MOPS	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
phage moi 100	Time6-phageFRS	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
carbon source	acetate (C)	-0.5
nitrogen source	L-Isoleucine (N)	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.5
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