Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3492
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-4.8
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-3.9
carbon source	L-Valine (C)	-2.1
carbon source	L-Valine (C)	-2.1
carbon source	L-Valine (C)	-1.8
phage	P. putida PUT 7 MOI 1	-1.6
temperature shift	Temperature shift 10_to_25; with MOPS	-1.1
temperature shift	Temperature shift 30_to_21; with MOPS	-1.1
phage	P. putida Sci Big MOI 0.1	-1.1
nitrogen source	L-Valine (N)	-1.1
nitrogen source	L-Valine (N)	-1.1
pH	Growth at pH7 and (C) D-Glucose	-0.7
no stress control	Growth with no stress	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
carbon source	Beta-alanine (C)	-0.6
pH	pH 8	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM	-0.6
carbon source	Beta-alanine (C)	-0.6
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.6
carbon source	Myristic (C)	-0.6
stress	R2A with Fusaric 480 ug/mL	-0.6
nitrogen source	nitrogen source nitrate 5mM	+0.7
pH	Growth at pH7 and (C) Trisodium citrate	+0.7
carbon source	4-Methyl-2-oxopentanoic (C)	+0.8
carbon source	4-Methyl-2-oxopentanoic (C)	+0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+1.1
		remove PP_3492