Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3463
phage P. putida Sci Big MOI 0.1 -0.9
phage P. putida Missley MOI 0.1 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8
carbon source D-Glucose (C) -0.7
carbon source L-Leucine (C) -0.7
nitrogen source Ammonium chloride (N); with MOPS -0.6
carbon source Valerolactone (C) -0.6
phage P. putida Sci small MOI 0.1 -0.5
temperature Growth at 25C; with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
carbon source 2-methyl-1-butanol (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
pH pH 6 +0.5
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5
carbon source Lignin Monomers (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6
temperature Growth at 25C +0.6
carbon source carbon source 4-vinylphenol 0.1 mM +0.6
nitrogen source NAG (N); with MOPS +0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
carbon source carbon source Glycerol 108.6 mM +0.7
nitrogen source D-2-Aminobutyric (N) +0.7
pH pH 7 +0.7
pH pH 9 +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.8
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.9
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PP_3463