Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3459
carbon source 1-Pentanol (C) -1.6
carbon source 1-Pentanol (C) -1.4
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -1.2
carbon source 1-Pentanol (C) -1.2
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) -1.1
phage P. putida PUT 7 MOI 1 -0.8
phage P. putida Sci small MOI 0.1 -0.6
carbon source Delta-Undecalactone (C) -0.5
carbon source Delta-Decalactone (C) -0.5
carbon source Delta-Undecalactone (C) -0.4
carbon source Delta-Decalactone (C) -0.4
carbon source Butanol (C) -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3
nitrogen source nitrate (N) -0.3
nitrogen source 1,6-Hexanediamine (N) -0.3
carbon source Delta-Nonalactone (C) -0.3
nitrogen source nitrogen source nitrite 0.5mM -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3
pH Growth at pH6 and (C) Trisodium citrate +0.3
temperature shift Temperature shift 10_to_25; with MOPS +0.3
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3
carbon source Valeric (C) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3
carbon source Valeric (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
carbon source butyrate (C) +0.3
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
nitrogen source NAG (N); with MOPS +0.4
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PP_3459