Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_3450
phage P. putida Missley MOI 0.1 -0.6
phage P. putida Sci small MOI 0.1 -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3
phage P. putida South MOI 0.1 -0.3
temperature shift Temperature shift 30_to_34; with MOPS -0.3
stress R2A with Fusaric 240 ug/mL -0.3
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3
pH Growth at pH6 and (C) D-Glucose -0.3
pH Growth at pH9 and (C) Trisodium citrate -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3
phage P. putida Sci small MOI 0.1 -0.3
pH Growth at pH9 and (C) Trisodium citrate -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3
nitrogen source NAG (N); with MOPS -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.2
r2a control R2A control +0.2
carbon source 1,3-Butandiol (C) +0.2
carbon source Myristic (C) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.3
stress R2A with Fusaric 120 ug/mL +0.3
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL +0.3
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
carbon source Valerolactone (C) +0.3
stress Geraniol 1 vol% +0.4
remove
PP_3450