Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_3426
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.4
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
nitrogen source 2,6-diaminopimelic (N) -0.4
pH Growth at pH7 and (C) Trisodium citrate -0.4
carbon source 5-Aminovaleric 10 mM (C) -0.3
carbon source D-Fructose (C) -0.3
micoeukaryotes C.elegans, mixed culture-2 -0.3
carbon source Vanillin (C) -0.3
nitrogen source TNT (N) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
nitrogen source TNT (N) -0.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3
nitrogen source Ammonium chloride and TNT (N) -0.3
carbon source D-Glucose (C) +0.3
temperature Growth at 25C +0.3
nitrogen source D-2-Aminobutyric (N) +0.3
carbon source Delta-Decalactone (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
no stress control Growth with no stress +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4
phage P. putida Sci small MOI 0.1 +0.4
phage P. putida Missley MOI 0.1 +0.5
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PP_3426