Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3393
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
phage P. putida Sci small MOI 0.1 -0.4
carbon source ferulate (C); with MOPS -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
carbon source Lauric (C) -0.3
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3
nitrogen source nitrite (N) +0.3
nitrogen source no extra (N); with MOPS +0.3
carbon source Octanoic (C) +0.3
phage P. put South MOI 10 +0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3
temperature shift Temperature shift 30_to_10; with MOPS +0.3
carbon source Decanoic (C) +0.3
carbon source ferulate (C); with MOPS +0.4
temperature Growth at 30C; with MOPS +0.4
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.4
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4
stress Growth with Chloride 500 mM; with MOPS +0.4
pH Valerolactone (C) pH 6.5 +0.4
phage P. putida Missley MOI 0.1 +0.4
carbon source carbon source D-Glucose 55.5 mM +0.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
carbon source D-Glucose (C) +0.4
no stress control Growth with no stress +0.4
nitrogen source D-2-Aminobutyric (N) +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
pH Growth at pH6 and (C) D-Glucose +0.5
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PP_3393