Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3383
nitrogen source	Ammonium chloride and TNT (N)	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
nitrogen source	Ammonium chloride and TNT (N)	-0.4
nitrogen source	Ammonium chloride and TNT (N)	-0.4
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.4
temperature	Growth at 10C	-0.4
carbon source	Trisodium citrate (C)	-0.4
nitrogen source	Ammonium chloride (N)	-0.4
carbon source	gluconate (C)	-0.4
nitrogen source	TNT (N)	-0.4
nitrogen source	Ammonium chloride and TNT (N)	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	-0.3
nitrogen source	Ammonium chloride (N)	-0.3
temperature shift	Temperature shift 30_to_4	-0.3
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.3
nitrogen source	NAG (N); with MOPS	-0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
nitrogen source	nitrite (N)	-0.3
phage	P. putida Missley MOI 0.1	+0.3
nitrogen source	D-2-Aminobutyric (N)	+0.3
no stress control	Growth with no stress	+0.3
nitrogen source	Hydantoin (N)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
pH	Growth at pH6 and (C) D-Glucose	+0.4
phage	P. putida Sci Big MOI 0.1	+0.4
phage	P. putida Sci small MOI 0.1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
phage	P. putida PUT 7 MOI 1	+0.6
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