Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3375
phage P. putida Sci small MOI 0.1 -1.2
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.9
nitrogen source D-2-Aminobutyric (N) -0.8
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.7
nitrogen source 2,6-diaminopimelic (N) -0.6
pH Growth at pH6 and (C) Trisodium citrate -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
temperature shift Temperature shift 30_to_21 -0.6
carbon source acetate (C) -0.6
temperature shift Temperature shift 30_to_21 -0.6
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.6
carbon source carbon source Bisabolol 45 mM -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
carbon source benzoic (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
temperature shift Temperature shift 10_to_21 -0.5
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.5
nitrogen source Propiolactam (N) -0.5
carbon source carbon source 4-vinylphenol 0.1 mM -0.5
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5
phage P. putida Missley MOI 0.1 +0.5
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5
carbon source Myristic (C) +0.5
pH Growth at pH7 and (C) Trisodium citrate +0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
stress Growth with Chloride 500 mM; with MOPS +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6
nitrogen source nitrogen source nitrate 5mM +0.7
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PP_3375