Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3365
pH	Growth at pH7 and (C) D-Glucose	-5.3
temperature	Growth at 30C; with MOPS	-5.3
nitrogen source	nitrate (N)	-5.2
carbon source	acetate (C)	-5.2
nitrogen source	Urea (N)	-5.2
pH	Growth at pH6 and (C) Trisodium citrate	-5.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-5.0
carbon source	ferulate (C); with MOPS	-5.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-4.2
pH	Growth at pH6 and (C) D-Glucose	-3.9
carbon source	D-Fructose (C)	-3.7
pH	pH 7	-3.7
carbon source	Trisodium citrate 10 mM (C)	-3.5
carbon source	Crotonic (C)	-3.1
pH	Valerolactone (C) pH 6.5	-3.0
pH	Growth at pH6 and (C) Trisodium citrate	-2.7
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-2.6
carbon source	2-Methylbutanoic (C)	-2.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-2.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.3
temperature	Growth at 30C; with MOPS	-2.2
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-2.2
stress	R2A with Fusaric 480 ug/mL	-2.2
stress	R2A with Fusaric 120 ug/mL	-2.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.9
pH	Growth at pH9 and (C) Trisodium citrate	-1.9
nitrogen source	nitrogen source nitrite 1mM	+2.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+3.0
		remove PP_3365