Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3361
pH Growth at pH7 and (C) D-Glucose -0.5
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
nitrogen source 2,6-diaminopimelic (N) -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
carbon source p-Coumaric (C) -0.4
pH pH 7 -0.3
carbon source ferulate (C); with MOPS -0.3
nitrogen source Ammonium chloride (N) -0.3
carbon source ferulate (C); with MOPS -0.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3
carbon source Ferulic Acid (C) -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
carbon source ferulate (C); with MOPS -0.3
carbon source 2,3-Butanediol (C) -0.3
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2
stress 3-methyl-1-butanol 0.4 vol% +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.3
carbon source Trisodium citrate (C) +0.3
no stress control Growth with no stress +0.3
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.3
temperature Growth at 30C; with MOPS +0.3
carbon source Valeric (C) +0.3
nitrogen source Propiolactam (N) +0.3
carbon source 1,3-Butandiol (C) +0.3
nitrogen source D-2-Aminobutyric (N) +0.8
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PP_3361