Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_3358
carbon source	p-Coumaric (C)	-5.4
carbon source	ferulate (C); with MOPS	-5.0
carbon source	p-Coumaric (C)	-4.9
carbon source	ferulate (C); with MOPS	-4.5
carbon source	p-Coumaric (C)	-3.8
carbon source	ferulate (C); with MOPS	-3.4
carbon source	p-Coumaric (C)	-3.1
carbon source	Ferulic Acid (C)	-2.9
carbon source	Ferulic Acid (C)	-2.5
carbon source	p-Coumaric (C)	-2.3
temperature shift	Temperature shift 30_to_25; with MOPS	-1.0
carbon source	BC Lignin Sorghum 10 vol% (C)	-0.8
stress	Growth with Chloride 500 mM; with MOPS	-0.8
pH	Growth at pH7 and (C) D-Glucose	-0.6
temperature shift	Temperature shift 30_to_25	-0.5
nitrogen source	2,6-diaminopimelic (N)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
phage	P. putida South MOI 10	-0.5
phage	P. put South MOI 10	-0.5
pH	Growth at pH7 and (C) D-Glucose	-0.5
no stress control	Growth with no stress	-0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
carbon source	Heptanoic (C)	+0.5
pH	pH 9	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.5
carbon source	L-Leucine (C)	+0.5
pH	pH 6	+0.5
nitrogen source	2,6-diaminopimelic (N)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.6
		remove PP_3358