Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3344
phage	P. putida PUT 7 MOI 1	-1.2
phage	P. putida Missley MOI 0.1	-0.8
r2a control	R2A control	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7
carbon source	D-Glucose (C); with MOPS	-0.7
nitrogen source	nitrogen source nitrate 5mM	-0.7
carbon source	D-Glucose (C)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
phage	P. putida Sci small MOI 0.1	-0.6
nitrogen source	nitrogen source nitrite 1mM	-0.6
temperature shift	Temperature shift 10_to_25; with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.6
carbon source	Vanillic Acid (C)	-0.6
nitrogen source	nitrogen source Ammonium chloride 20mM	-0.6
temperature shift	Temperature shift 30_to_10; with MOPS	-0.6
stress	Growth with Chloride 500 mM; with MOPS	+0.6
temperature shift	Temperature shift 10_to_21	+0.6
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	+0.6
carbon source	carbon source Bisabolol 45 mM	+0.6
nitrogen source	Ammonium chloride (N)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.7
pH	pH 6	+0.7
stress	Growth with Chloride 200 mM; with MOPS	+0.7
nitrogen source	D-2-Aminobutyric (N)	+0.7
carbon source	Valerolactone (C)	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
pH	Growth at pH7 and (C) Trisodium citrate	+0.8
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