Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_3322
pH	Valerolactone (C) pH 6.5	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
carbon source	ferulate (C); with MOPS	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
pH	Growth at pH8 and (C) D-Glucose	-0.5
nitrogen source	Ammonium chloride (N)	-0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
nitrogen source	Urea (N)	-0.4
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.4
nitrogen source	D-2-Aminobutyric (N)	-0.4
pH	Growth at pH9 and (C) D-Glucose	-0.4
pH	D-Glucose (C) pH 6.5	+0.4
carbon source	butyrate (C)	+0.4
r2a control	R2A control	+0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	+0.4
phage	P. putida Sci Big MOI 0.1	+0.4
toxin	pUC18_phdP1_pSU18T_docP1	+0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.5
stress	R2A with Fusaric 480 ug/mL	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.5
carbon source	3-methyl-3-buten-1-ol 0.25 vol% (C)	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.6
nitrogen source	2,6-diaminopimelic (N)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
phage	P. putida Sci small MOI 0.1	+0.7
		remove PP_3322