Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3303
temperature	Growth at 30C	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
carbon source	ferulate (C); with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
r2a control	R2A control	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.6
carbon source	5-Aminovaleric 10 mM (C)	-0.5
pH	pH 4	-0.5
temperature	Growth at 25C; with MOPS	-0.5
phage	P. put South MOI 10	-0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	Valeric (C)	-0.5
stress	R2A with Fusaric 120 ug/mL	+0.5
phage	P. putida South MOI 1	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.5
nitrogen source	nitrogen source nitrate 5mM	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.6
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	+0.6
carbon source	D-Glucose (C); with MOPS	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
pH	Valerolactone (C) pH 6.5	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
nitrogen source	Propiolactam (N)	+0.7
phage	P. putida PUT 7 MOI 1	+0.8
phage	P. putida South MOI 10	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
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