Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3296
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
carbon source L-Leucine (C) -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM -0.4
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.4
carbon source D-Glucose (C) with 20AA_mix_minus_Met -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
temperature Growth at 25C; with MOPS -0.4
carbon source D-Glucose (C) +0.4
carbon source Beta-alanine (C) +0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4
temperature Growth at 25C; with MOPS +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4
carbon source D-Glucose (C); with MOPS +0.4
nitrogen source nitrogen source nitrite 0.5mM +0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4
pH pH 5 +0.5
carbon source ferulate (C); with MOPS +0.6
stress Growth with Chloride 200 mM; with MOPS +0.6
phage PUT8 MOI 10 +0.7
phage PUT8 MOI 0.1 +0.8
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PP_3296