Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3285
carbon source Phenylacetic (C) -7.4
carbon source Phenylacetic (C) -4.6
nitrogen source D-2-Aminobutyric (N) -1.5
pH Growth at pH6 and (C) Trisodium citrate -1.4
nitrogen source 2,6-diaminopimelic (N) -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8
phage P. putida PUT 7 MOI 1 -0.8
stress Growth with Chloride 200 mM -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8
nitrogen source nitrogen source nitrite 1mM -0.7
carbon source Valeric (C) -0.7
nitrogen source D-2-Aminobutyric (N) -0.7
carbon source 4-Hydroxyvalerate (C) (40mM) -0.7
nitrogen source Ammonium chloride (N) -0.7
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7
phage P. putida Sci Big MOI 0.1 -0.7
nitrogen source nitrate (N) -0.6
carbon source 2-Methylbutanoic (C) -0.6
carbon source 4-Aminobutyric 10 mM (C) -0.6
carbon source carbon source Bisabolene 48.9 mM -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
carbon source Delta-Decalactone (C) +0.7
carbon source Valeric (C) +0.8
carbon source ferulate (C); with MOPS +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.0
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PP_3285