Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3246
phage	P. putida Sci small MOI 0.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4
nitrogen source	Ammonium chloride (N); with MOPS	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
carbon source	acetate (C)	-0.4
phage	P. putida Sci Big MOI 0.1	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.3
temperature	Growth at 30C; with MOPS	+0.4
temperature shift	Temperature shift 10_to_25; with MOPS	+0.4
pH	Growth at pH8 and (C) D-Glucose	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.4
temperature shift	Temperature shift 10_to_30; with MOPS	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
nitrogen source	NAG (N); with MOPS	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
phage	P. put South MOI 10	+0.4
pH	pH 6	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.7
micoeukaryotes	Dictyostellum sp.mixed culture-1	+1.0
nitrogen source	Propandiamine (N)	+1.1
micoeukaryotes	Dictyostellum sp.mixed culture-2	+1.2
micoeukaryotes	C.elegans, mixed culture-1	+1.5
micoeukaryotes	C.elegans, mixed culture-2	+1.6
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+1.7
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