Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3231
phage	P. putida Sci small MOI 0.1	-1.3
carbon source	ferulate (C); with MOPS	-1.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-1.0
carbon source	Tween 20 (C)	-0.8
nitrogen source	2,6-diaminopimelic (N)	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.7
pH	Valerolactone (C) pH 6.5	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.7
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.7
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
stress	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL	-0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
phage	P. putida South MOI 10	-0.5
temperature shift	Temperature shift 10_to_30	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.5
stress	Growth with Chloride 500 mM; with MOPS	-0.5
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	-0.5
pH	D-Glucose (C) pH 7.5	-0.5
nitrogen source	nitrate (N)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.5
carbon source	Lignin Monomers (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
temperature	Growth at 30C; with MOPS	+0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.6
temperature	Growth at 30C; with MOPS	+0.6
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