Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3209
phage P. putida Sci small MOI 0.1 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
phage P. putida Sci Big MOI 0.1 -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5
phage P. putida PUT 7 MOI 1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
temperature shift Temperature shift 30_to_21; with MOPS -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
temperature shift Temperature shift 30_to_25; with MOPS +0.4
carbon source BC Lignin Sorghum 10 vol% (C) +0.4
carbon source Octanoic (C) +0.4
temperature shift Temperature shift 30_to_4; with MOPS +0.4
nitrogen source NAG (N) +0.4
no stress control Growth with no stress +0.4
carbon source 4-Aminobutyric 10 mM (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
carbon source Valeric (C) +0.5
phage P. putida South MOI 10 +0.5
stress Growth with Chloride 200 mM; with MOPS +0.6
temperature Growth at 30C; with MOPS +0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.7
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PP_3209