Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3208
phage P. putida PUT 7 MOI 1 -0.7
nitrogen source Urea (N) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5
nitrogen source no extra (N); with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5
carbon source D-Glucose (C) -0.5
stress Growth with Chloride 500 mM -0.5
carbon source D-Glucose (C); with MOPS -0.5
temperature Growth at 25C; with MOPS -0.5
carbon source L-Leucine (C) -0.4
temperature Growth at 10C; with MOPS -0.4
temperature shift Temperature shift 30_to_25 -0.4
phage P. putida Sci small MOI 0.1 -0.4
pH pH 4 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4
stress R2A with Fusaric 240 ug/mL +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
carbon source carbon source 4-vinylphenol 0.1 mM +0.5
nitrogen source nitrogen source nitrate 5mM +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5
r2a control R2A control +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.5
pH pH 8 +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source carbon source 4-vinylphenol 0.01 mM +0.7
pH pH 7 +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0
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PP_3208