Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3204
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.9
carbon source	ferulate (C); with MOPS	-1.5
pH	Growth at pH9 and (C) D-Glucose	-1.4
pH	Growth at pH9 and (C) Trisodium citrate	-1.4
nitrogen source	NAG (N); with MOPS	-1.4
carbon source	Myristic (C)	-1.3
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-1.2
carbon source	Trisodium citrate (C)	-1.2
pH	Growth at pH6 and (C) D-Glucose	-1.2
temperature shift	Temperature shift 30_to_21; with MOPS	-1.2
pH	Growth at pH7 and (C) Trisodium citrate	-1.1
phage	P. putida South MOI 0.1	-1.0
carbon source	ferulate (C); with MOPS	-1.0
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
carbon source	Delta-Nonalactone (C)	-0.9
carbon source	D-Glucose (C)	-0.9
carbon source	Tween 20 (C)	-0.9
nitrogen source	no extra (N); with MOPS	-0.9
stress	Growth with Chloride 500 mM	-0.9
stress	Growth with Chloride 200 mM	-0.8
nitrogen source	nitrogen source nitrate 5mM	+0.9
phage	P. put PUT 10 MOI 1	+0.9
carbon source	carbon source Glycerol 108.6 mM	+0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+1.0
nitrogen source	Hydantoin (N)	+1.0
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+1.0
pH	pH 9	+1.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
phage	P. putida PUT 7 MOI 1	+1.5
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