Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3201
phage P. putida Sci small MOI 0.1 -1.9
carbon source D-Glucose (C); with MOPS -1.5
carbon source carbon source 4-vinylphenol 0.01 mM -1.3
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.1
nitrogen source 2,6-diaminopimelic (N) -1.1
pH Growth at pH7 and (C) D-Glucose -1.0
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0
nitrogen source Hippuric (N) -1.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9
pH D-Glucose (C) pH 6.5 -0.9
stress NaCl stress 250 mM -0.8
nitrogen source NAG (N); with MOPS +0.8
pH Growth at pH7 and (C) Trisodium citrate +0.8
temperature Growth at 34C +0.8
pH Growth at pH7 and (C) Trisodium citrate +0.9
pH Growth at pH6 and (C) D-Glucose +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9
pH Growth at pH6 and (C) Trisodium citrate +0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
pH Growth at pH7 and (C) D-Glucose +0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0
pH Growth at pH6 and (C) D-Glucose +1.1
stress Growth with Chloride 500 mM; with MOPS +1.2
carbon source Delta-Undecalactone (C) +1.3
carbon source Delta-Undecalactone (C) +1.6
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PP_3201