Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3199
phage	P. put South MOI 0.1	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
phage	P. putida Sci small MOI 0.1	-0.8
carbon source	acetate (C)	-0.8
temperature shift	Temperature shift 10_to_25; with MOPS	-0.6
stress	R2A with Fusaric 480 ug/mL	-0.6
carbon source	Valeric (C)	-0.6
nitrogen source	NAG (N); with MOPS	-0.6
stress	Growth with Chloride 500 mM; with MOPS	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.6
stress	R2A with Fusaric 480 ug/mL	-0.6
stress	R2A with Fusaric 480 ug/mL	-0.5
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.5
phage	P. put PUT 10 MOI 10	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	+0.5
carbon source	D-Glucose (C) with 20AA_mix_minus_Gly	+0.6
phage	PUT 8 MOI 1	+0.6
microaerobic m9	microaerobic M9	+0.6
pH	Growth at pH6 and (C) Trisodium citrate	+0.6
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.6
nitrogen source	Urea (N)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
nitrogen source	nitrate (N)	+0.8
carbon source	L-Leucine (C)	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
carbon source	Delta-Undecalactone (C)	+1.7
carbon source	Delta-Undecalactone (C)	+1.8
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