Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3195
temperature	Growth at 25C	-0.7
temperature shift	Temperature shift 30_to_34; with MOPS	-0.6
nitrogen source	NAG (N); with MOPS	-0.6
pH	Growth at pH7 and (C) D-Glucose	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
temperature	Growth at 30C	-0.5
temperature shift	Temperature shift 30_to_25	-0.5
temperature shift	Temperature shift 10_to_25	-0.5
carbon source	carbon source D-Glucose 55.5 mM	-0.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.5
pH	Growth at pH7 and (C) Trisodium citrate	-0.5
temperature	Growth at 25C; with MOPS	-0.5
stress	Growth with Chloride 500 mM; with MOPS	-0.5
carbon source	carbon source Bisabolene 48.9 mM	-0.5
temperature shift	Temperature shift 10_to_30; with MOPS	-0.4
temperature shift	Temperature shift 30_to_34	-0.4
nitrogen source	Urea (N)	-0.4
temperature	Growth at 34C	-0.4
temperature	Growth at 30C; with MOPS	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
temperature shift	Temperature shift 30_to_21	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.4
pH	pH 6	-0.4
pH	pH 5	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
carbon source	3-Hydroxydecanoic (C)	+0.4
carbon source	Myristic (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
		remove PP_3195