Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3190
phage	P. putida Sci small MOI 0.1	-2.0
nitrogen source	no extra (N); with MOPS	-1.9
temperature shift	Temperature shift 30_to_21; with MOPS	-1.9
pH	pH 9	-1.5
carbon source	butyrate (C)	-1.3
stress	2-Ethylhexanol 0.4 vol%	-1.2
carbon source	carbon source 4-vinylphenol 0.01 mM	-1.2
carbon source	2-methyl-1-butanol (C)	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.2
phage	PUT 8 MOI 1	-1.1
carbon source	butyrate (C)	-1.1
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.0
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-1.0
carbon source	Crotonic (C)	-1.0
temperature	Growth at 30C; with MOPS	-0.9
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.9
pH	pH 7	-0.9
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
carbon source	Myristic (C)	+0.9
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	+0.9
pH	Growth at pH6 and (C) D-Glucose	+1.0
nitrogen source	Ammonium chloride (N)	+1.0
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+1.1
nitrogen source	Ammonium chloride and TNT (N)	+1.1
nitrogen source	NAG (N); with MOPS	+1.2
pH	Valerolactone (C) pH 6.5	+1.3
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