Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3187
nitrogen source	Cytosine (N)	-1.2
nitrogen source	Cytosine (N)	-1.2
nitrogen source	nitrogen source nitrite 1mM	-0.8
temperature	Growth at 30C	-0.7
temperature shift	Temperature shift 10_to_30	-0.6
nitrogen source	Ammonium chloride (N)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.6
nitrogen source	NAG (N); with MOPS	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.5
temperature shift	Temperature shift 30_to_25; with MOPS	-0.5
nitrogen source	Hippuric (N)	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.5
temperature shift	Temperature shift 10_to_30	-0.5
nitrogen source	3-aminobutyric (N)	-0.5
pH	Growth at pH9 and (C) D-Glucose	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
carbon source	D-Glucose (C)	-0.5
temperature shift	Temperature shift 10_to_25; with MOPS	-0.5
pH	Growth at pH8 and (C) D-Glucose	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.4
r2a control	R2A control	-0.4
stress	Growth with Chloride 500 mM; with MOPS	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
nitrogen source	nitrogen source nitrate 5mM	-0.4
temperature shift	Temperature shift 30_to_34; with MOPS	-0.4
temperature	Growth at 30C	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.4
nitrogen source	D-2-Aminobutyric (N)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
phage	P. putida Sci Big MOI 0.1	+1.2
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